Publications

Laura Perez-Fons, Tatiana Maria Ovalle, Margit Drapal, Maria Alejandra Ospina, Anestis Gkanogiannis, Adriana Bohorquez-Chaux, Luis Augusto Becerra López-Lavalle, Paul David Fraser (2023). Integrated genetic and metabolic characterization of Latin American cassava (Manihot esculenta) germplasm. Plant Physiology.

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Mauricio Peñuela, Camila Riccio-Rengifo, Jorge Finke, Camilo Rocha, Anestis Gkanogiannis, Rod A. Wing, Mathias Lorieux (2023). Prediction of crossover recombination using parental genomes. PLOS ONE 2023, 18(2), 1-21;.

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Mauricio Peñuela, Jenny Johana Gallo-Franco, Jorge Finke, Camilo Rocha, Anestis Gkanogiannis, Thaura Ghneim-Herrera, Mathias Lorieux (2022). Methylation in the CHH Context Allows to Predict Recombination in Rice. Int. J. Mol. Sci. 2022, 23(20), 12505;.

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Angélica M. Jaramillo, Santiago Sierra, Paul Chavarriaga-Aguirre, Diana Katherine Castillo, Anestis Gkanogiannis, Luis Augusto Becerra López-Lavalle, Juan Pablo Arciniegas, Tianhu Sun, Li Li, Ralf Welsch, Erick Boy, Daniel Álvarez (2022). Characterization of cassava ORANGE proteins and their capability to increase provitamin A carotenoids accumulation. PLoS ONE 17(1): e0262412..

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Anestis Gkanogiannis, Luis Augusto Becerra, et al (2021). The diversity, origin and evolution of wild and landrace varieties of M.esculenta from RADSeq data. In Preparation.

Anestis Gkanogiannis, Luis Augusto Becerra, et al (2021). Two dense genetic maps and WhiteFly infestation QTLs from RADSeq and WGS data of two F1 M.esculenta populations. In Preparation.

Mathias Lorieux, Anestis Gkanogiannis, Christopher Fragoso, Jean-François Rami (2019). NOISYmputer: genotype imputation in bi-parental populations for noisy low-coverage next-generation sequencing data. In bioRxiv 658237.

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Gkanogiannis Anestis, Dereeper Alexis, Szurek Boris, Zarate Carlos, López Camilo, Becerra López-Lavalle Luis Agusto, Ruiz Manuel (2018). The cassava genome hub. In Proceedings Plant and Animal Genome XXVI Conference, 2018 PAG, San Diego.

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Becerra López-Lavalle Luis Agusto, Villafrade Rodriguez Zapata Fausto, Ovalle Tatiana, Ruiz Manuel, Gkanogiannis Anestis, Tohmé Joe (2018). Capturing next-generation genome wide molecular markers in cassava helps to untangle the crop's genetic improvement history. In Proceedings Plant and Animal Genome XXVI Conference, 2018 PAG, San Diego.

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Villafrade Rodriguez Zapata Fausto, Ovalle Tatiana, Ruiz Manuel, Gkanogiannis Anestis, Becerra López-Lavalle Luis Augusto (2018). Population structure of wild and cultivated plants shows hierarchical organization of cassava germplasm diversity. In Proceedings Plant and Animal Genome XXVI Conference, 2018 PAG, San Diego.

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South Green members (2016). The South Green portal: a comprehensive resource for tropical and Mediterranean crop genomics. Current Plant Biology, December 2016.

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Gkanogiannis Anestis, Thomas Brüls (2016). A scalable assembly-free variable selection algorithm for biomarker discovery from metagenomes. BMC Bioinformatics 17(1):311, August 2016.

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Anestis Gkanogiannis, Theodore Kalamboukis (2010). A Perceptron-Like Linear Supervised Algorithm for Text Classification. In Advanced Data Mining and Applications (ADMA), Lecture Notes in Computer Science, 2010, Volume 6440/2010, 86-97, Chongqing, China.

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Alexandros Stougiannis, Anestis Gkanogiannis, Theodore Kalamboukis (2010). IPL at CLEF 2010. In CLEF working notes 2010, Padua, Italy.

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Gkanogiannis Anestis, Kalamboukis Theodore (2009). A modified and fast Perceptron learning rule and its use for Tag Recommendations in Social Bookmarking Systems. In ECML PKDD Discovery Challenge 2009 (DC09), International Workshop at the ECML/PKDD in Bled, Slovenia, September 7th, 2009.

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Gkanogiannis Anestis, Kalamboukis Theodore (2008). A novel supervised learning algorithm and its use for Spam Detection in Social Bookmarking Systems. In Winner of ECML PKDD Discovery Challenge 2008 (DC08), task 1: Spam Detection in Social Bookmarking Systems, Adwerp, Belgium, 2008.

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Gkanogiannis Anestis, Kalamboukis Theodore (2008). An Algorithm for Text Categorization. In The 31st Annual International ACM SIGIR Conference, 20-24 July 2008, Singapore.

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Kotsonis Vaggelis, Gkanogiannis Anestis, Kalamboukis Theodore, Eliakis Stelios (2008). A Greek-English Cross Language Medical Information Retrieval System. In Conference on Medical Imaging and Informatics, MIMI 2007.

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